Collection
117 datasets
Spatial
Spatially-resolved transcriptomics and imaging datasets.
Try collection in Drylab
Datasets
(Total 117 datasets)
Product
Species
Anatomical entity
Disease state
Software
A Spatial Transcriptomics Atlas of the Malaria-infected Liver Indicates a Crucial Role for Lipid Metabolism and Hotspots of Inflammatory Cell Infiltration
Mouse
Spatial
MASLD
Expression profiling by high throughput sequencing, GPL34512;GPL24247
Mus musculus
Liver
MASLD/NAFLD/NASH
A spatial vascular transcriptomic, proteomic and phosphoproteomic atlas unveils an angiocrine Tie Wnt signaling axis in the liver
Mouse
Spatial
MASLD
Expression profiling by high throughput sequencing, GPL21626
Mus musculus
Liver
MASLD/NAFLD/NASH
Aggregate of Mouse Brain Sections: CytAssist for FFPE
Mouse
Neuroscience
Spatial
Spatial Gene Expression
Mouse
Brain
healthy
Space Ranger
Aggregate of Mouse Brain Sections: Visium Fresh Frozen, Whole Transcriptome
Mouse
Neuroscience
Spatial
Spatial Gene Expression
Mouse
Brain
healthy
Space Ranger
Analysis of mouse livers fed with high cholesterol diet and alcohol by spatial transcriptomics
Mouse
Spatial
MASLD
Xenium; Other, GPL33896
Mus musculus
Liver
MASLD/NAFLD/NASH
Astrocyte Elevated Gene-1/Metadherin (AEG-1/MTDH) in Myeloid Cells Regulates Metabolic Dysfunction-Associated Steatohepatitis (MASH) [Spatial Transcriptomics]
Mouse
Spatial
MASLD
Other, GPL30172
Mus musculus
Liver
MASLD/NAFLD/NASH
Biomarker Identification via Spatial Transcriptomics Profiling of Colorectal Cancer and Colorectal Cancer with Liver Metastasis Stem Cells
Human
Oncology
Spatial
MASLD
GeoMx DSP; Other, GPL24676
human
Liver
MASLD/NAFLD/NASH
Broad SCP SCP3359 — Metabolic stress primes cancer: Human liver Xenium spatial (MASH cirrhosis vs control)
Human
Oncology
Spatial
spatial
human
Liver
MASLD/NAFLD/NASH
Broad SCP SCP3772 — Toward a Spatially Resolved Human MASLD Meta-Atlas: Systematic Review and Technical Audit
Human
Spatial
spatial
human
Liver
MASLD/NAFLD/NASH
CELLxGENE 33359f8a — Liver Visium of Mouse sample JBO012
Mouse
Spatial
MASLD
spatial
mouse
Liver
MASLD/NAFLD/NASH
CELLxGENE 5f729037 — Pooled NAFLD mouse liver Visium data
Mouse
Spatial
MASLD
spatial
mouse
Liver
MASLD/NAFLD/NASH
CELLxGENE abe2b13f — Liver Visium of Mouse sample JBO009
Mouse
Spatial
MASLD
spatial
mouse
Liver
MASLD/NAFLD/NASH
CELLxGENE ec428c5a — Liver Visium of Mouse sample JBO010
Mouse
Spatial
MASLD
spatial
mouse
Liver
MASLD/NAFLD/NASH
CRISP enables comparisons of image-based spatial transcriptomic segmentation quality across ten organs
Mouse
Spatial
MASLD
Xenium; Other, GPL33896
Mus musculus
Liver
MASLD/NAFLD/NASH
Characterization of HBV and co-infection with HDV and HIV through spatial transcriptomics
Human
Spatial
MASLD
GeoMx DSP; Other, GPL30991
human
Liver
MASLD/NAFLD/NASH
Decoding the Cell-Type and Spatial Roles of H19 in Cholestatic Liver Injury Through Single-Nucleus and Spatial Transcriptomics
Mouse
Spatial
MASLD
Expression profiling by high throughput sequencing; Other, GPL24247;GPL30172
Mus musculus
Liver
MASLD/NAFLD/NASH
Dose-dependent disruption of hepatic zonation by 2,3,7,8-tetrachlorodibenzo-p-dioxin in mice: integration of single-nuclei RNA sequencing and spatial transcriptomics
Mouse
Spatial
MASLD
Other, GPL32362
Mus musculus
Liver
MASLD/NAFLD/NASH
Dynamic control of metabolic zonation and liver repair by endothelial cell Wnt2 and Wnt9b revealed by single cell spatial transcriptomics using Molecular Cartography
Mouse
Spatial
MASLD
Molecular Cartography; Other, GPL32082
Mus musculus
Liver
MASLD/NAFLD/NASH
E-GEAD-1190 — Spatial transcriptomic profiling of chronic hepatitis across major etiologies in human liver (incl. MASH)
Human
Spatial
MASLD
spatial
human
Liver
MASLD/NAFLD/NASH
Glycolysis in hepatic stellate cells coordinates fibrogenic extracellular vesicle release spatially to amplify liver fibrosis
Human
Spatial
MASLD
Orbitrap Exploris 480
Homo sapiens (human), Bos taurus (bovine)
Liver
MASLD/NAFLD/NASH
Showing
1–20
of
117
1
2
3
4
5
6