10k Cells from a MALT Tumor - Gene Expression with a Panel of TotalSeq™-B Antibodies

Cells from a dissociated Extranodal Marginal Zone B-Cell Tumor (MALT: Mucosa-Associated Lymphoid Tissue) stained with a panel of TotalSeq™-B antibodies.

  • 8,412 cells detected
  • Sequenced on Illumina NovaSeq with approximately 32,000 reads per cell
  • 28bp read1 (16bp Chromium barcode and 12bp UMI), 91bp read2 (transcript), and 8bp I7 sample barcode
  • run with --expect-cells=10000
  • This dataset was generated using a pre-release set of TotalSeq-B antibodies. The barcode sequences have since changed. Please refer to https://www.biolegend.com/totalseq for the latest conjugated barcode information.

To maintain donor anonymity, sequence data for this sample is not currently available.

Tags
HumanImmunologyOncology
Product
Universal 3'
Software
Cell Ranger
Pipeline
3.0.0
Species
Human
Anatomical entity
Blood
Disease state
B-Cell Tumor (MALT)
Cell/nuclei count
8,412
Date published
Nov 19, 2018
Files
11
Total size
806.2 MB